Riza Batista-Navarro, PhD

  • Extending the Reading Pipeline: Detecting New, Experimental Result-based Knowledge, Big Mechanism Principal Investigators' Meeting, Virginia, USA, 21st March 2016.
  • Federating Text Mining Tools to Construct Ensemble Reading-for-Assembly Systems, Big Mechanism Principal Investigators' Meeting, Virginia, USA, 21st March 2016.
  • Bridging text-mined biomolecular events to pathway models using approximate subgraph matching techniques, the 16th International Conference on Systems Biology, Singapore, 23rd November 2015.
  • Augmenting the Medical Subject Headings vocabulary with semantically rich variants to improve disease mention normalisation, the Fifth BioCreative Challenge Evaluation Workshop, Sevilla, Spain, 10th September 2015.
  • Semi-automatic curation of chronic obstructive pulmonary disease phenotypes using Argo, the Fifth BioCreative Challenge Evaluation Workshop, Sevilla, Spain, 10th September 2015.
  • Brick by Brick: Building Deep Reading Workflows with Uncertainty and Negation Detection, Big Mechanism Principal Investigators' Meeting, Virginia, USA, 15th July 2015.
  • Argo as a Federated Reading System, Big Mechanism Principal Investigators' Meeting, Virginia, USA, 13th July 2015.
  • Fine-tuning Modular Text Mining Solutions for the Shallow and Deep Reading Tasks, Big Mechanism Principal Investigators' Meeting, Virginia, USA, 23th January 2015.
  • Enriching the Legacy Literature with OCR Corrections and Text-mined Semantic Metadata, Symposium on Access to Digitization Tools And Methods, Taxonomic Database Working Group 2014 Annual Conference (TDWG 2014), Jönköping, Sweden, 27th October 2014.
  • A Strategy for Annotating Clinical Records with Phenotypic Information relating to the Chronic Obstructive Pulmonary Disease, Phenotype Day 2014, the 22nd Annual International Conference on Intelligent Systems for Molecular Biology (ISMB 2014), Boston, USA, 12th July 2014.
  • Customisable Curation Workflows in Argo, the Fourth BioCreative Challenge Evaluation Workshop (BioCreative IV), Bethesda, Maryland, USA, 9th October 2013.
  • Chemistry-specific Features and Heuristics for Developing a CRF-based Chemical Named Entity Recogniser, the Fourth BioCreative Challenge Evaluation Workshop (BioCreative IV), Bethesda, Maryland, USA, 8th October 2013.
  • NaCTeM CTD Web Services, the Fourth BioCreative Challenge Evaluation Workshop (BioCreative IV), Bethesda, Maryland, USA, 7th October 2013.
  • Towards a Better Understanding of Discourse: Integrating Multiple Discourse Annotation Perspectives Using UIMA, the 7th Linguistic Annotation Workshop and Interoperability with Discourse, 51st Annual Meeting of the Association for Computational Linguistics (ACL 2013), Sofia, Bulgaria, 8th August 2013.
  • PathText: Finding pathway evidence in literature, MIB Research Conference 2013, Manchester Institute of Biotechnology, Manchester, 24th June 2013.
  • Adapting the Cluster Ranking Supervised Model to Resolve Coreferences in the Drug Literature, the Fourth International Symposium on Languages in Biology an Medicine (LBM 2011), Singapore, 15th December 2011.