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This page visualizes
validation
data brought into Jmol using the LOAD /val option. For example: load *1cbs/val  Zoom out automatically Add labels raw data (JSON) summary report (PDF) full report (PDF) Click on an atom to center it and show the electron density within Angstroms of its group. zoom out set platformSpeed... 8 7 6 5 4 3 2 1 |
 Jmol._Canvas2D (Jmol) "jmolApplet0"[x] loadScript j2s/core/package.js loadScript j2s/core/corejmol.z.js loadScript j2s/J/translation/PO.js loadScript j2s/core/corescript.z.js JSmol exec jmolApplet0 start applet null Jmol JavaScript applet jmolApplet0__674883644123204__ initializing Jmol getValue debug null Jmol getValue logLevel null Jmol getValue allowjavascript null AppletRegistry.checkIn(jmolApplet0__674883644123204__) vwrOptions: { "name":"jmolApplet0","applet":true,"LOADSTRUCTCallback":"fileLoaded","documentBase":"https://personalpages.manchester.ac.uk/staff/T.Wallace/jsmol/validation.htm","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__674883644123204__","codePath":"https://personalpages.manchester.ac.uk/staff/T.Wallace/jsmol/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"674883644123204","bgcolor":"white" } setting document base to "https://personalpages.manchester.ac.uk/staff/T.Wallace/jsmol/validation.htm" (C) 2015 Jmol Development Jmol Version: 14.29.37 2019-04-12 11:10 java.vendor: Java2Script (HTML5) java.version: 2018-01-28 23:38:52 (JSmol/j2s) os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com) Access: ALL memory: 0.0/0.0 processors available: 1 useCommandThread: false appletId:jmolApplet0 (signed) Jmol getValue emulate null defaults = "Jmol" Jmol getValue boxbgcolor null Jmol getValue bgcolor white backgroundColor = "white" Jmol getValue ANIMFRAMECallback null Jmol getValue APPLETREADYCallback Jmol._readyCallback APPLETREADYCallback = "Jmol._readyCallback" callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY Jmol getValue ATOMMOVEDCallback null Jmol getValue AUDIOCallback null Jmol getValue CLICKCallback null Jmol getValue DRAGDROPCallback null Jmol getValue ECHOCallback null Jmol getValue ERRORCallback null Jmol getValue EVALCallback null Jmol getValue HOVERCallback null Jmol getValue IMAGECallback null Jmol getValue LOADSTRUCTCallback fileLoaded LOADSTRUCTCallback = "fileLoaded" callback set for LOADSTRUCTCallback fileLoaded LOADSTRUCT Jmol getValue MEASURECallback null Jmol getValue MESSAGECallback null Jmol getValue MINIMIZATIONCallback null Jmol getValue SERVICECallback null Jmol getValue PICKCallback null Jmol getValue RESIZECallback null Jmol getValue SCRIPTCallback null Jmol getValue SYNCCallback null Jmol getValue STRUCTUREMODIFIEDCallback null Jmol getValue doTranslate null language=en_US Jmol getValue popupMenu null Jmol getValue script null Jmol getValue loadInline null Jmol getValue load null Jmol applet jmolApplet0__674883644123204__ ready script 1 started callback set for pickcallback jmolOnClick PICK pickcallback = "jmolOnClick" measurementUnits = "angstroms" zoomLarge = false loadScript j2s/core/coretext.z.js loading 1cbs... FileManager.getAtomSetCollectionFromFile(https://www.ebi.ac.uk/pdbe/entry-files/download/1cbs/val.cif) FileManager opening url https://www.ebi.ac.uk/pdbe/entry-files/download/1cbs/val.cif Time for openFile(https://www.ebi.ac.uk/pdbe/entry-files/download/1cbs/val.cif): 537 ms File Error:unrecognized file format for file https://www.ebi.ac.uk/pdbe/entry-files/download/1cbs/val.cif NetworkError: Failed to execute 'send' on 'XMLHtt pRequest': Failed to load 'https://www.ebi.ac.uk/p dbe/entry-files/download/1cbs/val.cif'. loadScript j2s/JV/PropertyManager.js loadScript j2s/core/coreprop.z.js script ERROR: unrecognized file format for file https://www.ebi.ac.uk/pdbe/entry-files/download/1cbs/val.cif NetworkError: Failed to execute 'send' on 'XMLHtt pRequest': Failed to load 'https://www.ebi.ac.uk/p dbe/entry-files/download/1cbs/val.cif'. ---- load <<<<"*1cbs/val" Script completed Jmol script terminated | |||
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