Dr. Thomas Andrew Waigh
       Contact: t.a.waigh@manchester.ac.uk
 
Picture of Tom Waigh
Address: Biological Physics, School of Physics and Astronomy, University of Manchester, Oxford Rd, Manchester, M13 9PL, UK.
Tel: 0161 306 8881

                Dr. Thomas A. Waigh graduated from the University of Edinburgh in 1994 with a BSc in Physics. He earned his Ph.D. in Physics in 1997 from the Cavendish Laboratory (Cambridge). Subsequently he did a post-doc at the College de France, Paris (2 years) in the laboratory of Pierre Gilles de Gennes (Nobel Prize for Physics 1991). He was appointed to a lectureship grade A in the Polymers and Complex Fluids Group in the Department of Physics of Leeds University in 2000 and moved to a lectureship grade B at the Biological Physics group in the Department of Physics of Manchester University in 2006. He has studied a range of biological systems including: carbohydrates, polyelectrolytes, nucleic acids, proteins, proteoglycans and liquid crystals.  He is a member of both the Biological Physics and Polymer Physics committees of the Institute of Physics. He has published over 50 articles in international peer reviewed journals.

Research Interests

                In the field of quasi-elastic scattering he has successfully built a correlator based optical fiber photon correlation spectrometer (picorheometer), investigated the dynamics of sticky ionomers at the 100ps-10ns range using neutron spin echo, and examined the fast internal dynamic modes (10ns-1000s) of peptides, titin, proteoglycans, and glycoproteins using polarized and depolarized light.  He is involved in the development of new X-ray based speckle experiments and is on the organizing committee of the I13L ‘X-ray Imaging and Coherence’ beam line on the Diamond synchrotron (completion date 2011).

In the field of microrheology his group has performed a series of successful experiments including magnetic tweezer, particle tracking, optical coherence tomography picorheology and diffusing wave spectroscopy. He has written a review on microrheology and has developed the technique in collaboration with Ralph Colby at Pennsylvania State University (USA). Recent experiments using particle tracking technique have allowed live intracellular mechanical spectroscopy experiments to be performed in the frequency range 0.1-40,000Hz using a fast video camera. This allowed individual motions of myosins and dynenins to be observed (~20nm steps) as well as the thermal bending motion of intracellular scaffolding (actins and microtubules). Furthermore studies have been made on intact cardiac thin filaments to examine their self-assembly and elasticity. T.A.Waigh has been involved in two successful projects to build one dimensional and three dimensional magnetic tweezers.

                   Ion-containing polymers: X-ray work on hydrophobic and hydrophobically modified polyelectrolytes has identified new scaling regimes for their structure (Rayleigh charge instability) and viscoelasticity. Random and block ionomers have been studied using a range of neutron, X-ray, light and rheological techniques. Models have been developed to understand the materials’ sticky viscoelasticity.

                   Biological polymers: A chiral side-chain liquid-crystalline model was developed for the physical properties of starch, explaining a series of phenomena including self-assembly and gelatinisation.  This model has now been widely accepted in the carbohydrate community. The dynamics of amyloid type peptides have been examined both internally and in shear flow. The elasticity of muscle proteins (titin and actin) has been studied using scattering and microrheology techniques. A model has been developed for the viscoelasticity of flexible comb polyelectrolytes and applied to the behavior of proteoglycans, glycoproteins and synthetic polystyrene sulphonates. The work on hydrophobic polyelectrolytes has culminated in clear evidence (AFM, TEM, PCS, SANS and rheology) of a multiglobular (dumbbell) structure for MU6 mucin.

Mucin

                   Live cells: the fluids mechanics and motility of amoeba proteus were examined at high speeds. The life cycle of bacterial thin films has been investigated. Labeled vesicular transport has been studied in Hela cells using fluorescence microscopy and a first passage statistical analysis of individual vesicle motility was made.

Amoeba


Research facilities
Photon correlation spectroscopy equipment is available in the group of T.A.Waigh and allows the dynamics of solution state biomolecules to be measured (12.5ns-1000s). This apparatus is suitable for the diffusive wave spectroscopy technique, which provides access to the high frequency rheological parameters of biological materials (1-107Hz). Two fluorescent microscopes in the biological physics laboratory allow fluorescently labeled complex fluids to be imaged with submicron accuracy. Fast particle tracking (100KHz, fast digital camera), optical coherence tomography picorheology and magnetic microrheology (two tweezer apparatus in different geometries for force versus dynamic sensitivity) are also available. A bohlin  gemini fluids rheometer is also available. We have an Abbe refractometer that can measure the refractive index of solutions with 10-4-10-5 resolution.

Teaching Biological Physics
I recently completed a text book on molecular biophysics called 'Applied Biophysics: A Molecular Approach for Physical Scientists'. The book was written for fourth year undergraduates in physics as a simple compact introduction to biological physics. It stresses the application of models and techniques developed in the field of soft-condensed matter to biology. 
Applied biophysics cover

The book can be purchased directly from Wiley or at www.Amazon.co.uk. If you spot any errors please contact me.


Publications
2009
(55) R.M.L.Evans, M.Tassieri, D.Auhl, T.A.Waigh, ‘Direct conversion of rheological compliance measurements into storage and loss moduli’, Physical Review E, 2009, 80, 1, 12501.
(54) P.D.Coffey, M.J.Swann, T.A.Waigh, F.Schedin, J.R.Lu, ‘Multiple path length dual polarization interferometry’, Optics Express, 2009, 17, 13, 10959-10969.
(53) S.Pregent, S.Adams, M.Butler, T.A.Waigh, ‘The Impact and Deformation of a Viscoelastic Drop at the Air-Liquid Interface’, Journal of Colloid and Interface Science, 2009, 331, 163-173.
(52) H.Xu, J.Wang, S.Han, J.Wang, D.Yu, H.Zhang, D.Xia, X.Zhao, T.A.Waigh, J.R.Lu, ‘Hydrophobic-Region-Induced transitions in self-assembled peptide nanostructures’, Langmuir, 2009, 25, 7, 4115-4123.  
2008
(52) H.Xu, J.Wang, S.Han, J.Wang, D.Yu, H.Zhang, D.Xia, X.Zhao, T.A.Waigh, J.R.Lu, ‘Hydrophobic-Region-Induced transitions in self-assembled peptide nanostructures’, Langmuir, 2008, in print.
(51)*A.Papagiannopoulos, C.Fernyhough, T.A.Waigh, A.Radulescu, ‘Scattering study of the structure of polystyrene sulfonate comb polyelectrolytes in solution’, Macromolecular Chemistry and Physics, 2008, 209, 2475-2486.
 (50) *M.Tassieri, R.M.L. Evans, L.Barbu Tudoran, G. Nasir Khaname, J. Trinick, T.A. Waigh, ‘Dynamics of semi-flexible polymer solutions in the highly entangled regime’, Physical Review Letters, 2008, 101, 198301.
(49) *E.Di cola, G.Yakubov, T.A.Waigh, ‘Double-Globular Structure of Porcine Stomach Mucin: A Small-Angle Scattering Study’, Biomacromolecules, 2008, 9, 11, 3216.
(48) F.Pan, X.B.Zhao, T.A.Waigh, J.R. Lu, ‘Interfacial adsorption and denaturisation of human milk and recombinant rice lactoferrin’, Biointerfaces, 2008, 3, 2, FB36-43.
(47) *S.S.Rogers, C.van de Walle, T.A.Waigh, ‘Life cycle of bacterial thin films’, Langmuir, 2008, 24, 23, 13549-13555.
(46)*M.Jahnel, T.A.Waigh, J.R.Lu, ‘Thermal fluctuations of fibrin fibres at short time scales’,  Soft Matter, 2008, 4, 1438 – 1442.
(45) *R.C. Sharma, A.Papagiannopoulos, T.A.Waigh, ‘Optical coherence tomography picorheology of biopolymer solutions’, Applied Physics Letters, 2008, 92, 173903.
(44) R.C.Sharma, T.A.Waigh, J.P.Singh, ‘Modulated optical phase conjugation in rhodamine 110 doped boric acid films’, Applied Physics Letters, 2008, 92, 101125.
(43) X.Zhao, Z.Q.Zhang, F.Pan, T.A.Waigh, J.R.Lu, ‘Plasmid DNA Complexation with Phosphorylcholine Diblock Copolymers and Its Effects on Cell Transfection’, Langmuir, 2008, 24, 6881-6888.
(42) R.C.Sharma, T.A.Waigh, J.P.Singh, ‘Narrow band optical filter in fluorescein doped boric acid glass saturable absorber thin films’, Optics Communications, 2008, 281, 10, 2985-2988.
(41) *A.Papagiannopoulos, T.A.Waigh, T.E.Hardingham, ‘The viscoelasticity of self-assembled proteoglycan combs’, Faraday Discussions, 2008, 139, 337.
(40) *S.S.Rogers, T.A.Waigh, J.Lu, ‘Intracellular microrheology of motile amoeba proteus’, Biophysical Journal, 2008, 94, 2170-2178.
(39) *M.Tassieri, R.M.L.Evans, L.Barbu-Tudoran, J.Trinick, T. A.Waigh, ‘The Self-assembly, Elasticity and Dynamics of Cardiac Thin Filaments’, Biophysical Journal, 2008, 94, 2170-2178.
2007
(38) X.Zhao, Z.Zhang, F.Pan, C.Grant, Y.Ma, S.P.Armes, Y.Tang, A.L.Lewis, T.Waigh, J.R.Lu, ‘Nanostructure of Polyplexes Formed between Cationic Diblock Copolymer and Antisense Oligodeoxynucleotide and Its Influence on Cell Transfection Efficiency’, Biomacromolecules, 2007, 8, 3493-3502.
(37) G.E.Yakubov, A.Papagiannopoulos, E.Rat, T.A.Waigh ‘The charge and interfacial behaviour of short side-chain heavily glycosylated porcine stomach mucin’, Biomacromolecules, 2007, 8, 3791-3799.
(36) G.E.Yakubov, A.Papagiannopoulos, E.Rat, R.L.Easton, T.A.Waigh,
‘The molecular structure, and rheological properties of short side-chain heavily glycosylated porcine stomach mucin’, Biomacromolecules, 2007, 8, 3467-3477.
(35) S.S.Rogers, T.A.Waigh, X.Zhang, J.Lu, ‘Precise particle tracking against a complicated background: polynomial fitting with a Gaussian weight’, Physical Biology, 2007, 4, 220-227.
(34)*T.A.Waigh, ‘Applied Biophysics; A Molecular Approach for Physical Scientists’, Undergraduate textbook, August 2007, Wiley, UK.
 http://www.amazon.com/Applied-Biophysics-Molecular-Approach-Scientists. Reprinted 2008.
(33)*E.de Luca, T.A.Waigh, M.Monkenbusch, J.S.Kim, H.S.Jeon, ‘Neutron spin echo study of the dynamics of micellar solutions of randomly sulphonated polystyrene’, Polymer, 2007, 48, 3930-3934.
(32)L.M.Carrick, A.Aggeli, N.Boden, J.Fisher, E.Ingham, T.A.Waigh, ‘Effect of ionic strength on the self-assembly, morphology and gelation of pH responsive beta-sheet tape forming peptides’, Tetrahedron, 2007, 63, 31, 7457-7467.
(31)*A.J.Hodrien, T.A.Waigh, A.M.Voice, G.E.Blair, S.M.Clarke, ‘Adsorption of DNA onto positively charged amidine colloidal spheres and the resultant bridging interaction’, International Journal of Biological Macromolecules, 2007, 41, 146-153.
(30)*Di Cola E, Waigh TA, Colby RH, ‘Dynamic light scattering and rheology studies of aqueous solutions of amphiphilic sodium maleate containing copolymers’, Journal of Polymer Science Pt. B- Polymer Physics, 2007, 45, 7, 774-785.
2006
(29) *A.Papagiannopoulos, T.A.Waigh, T.Hardingham, M.Heinrich, ‘The solution structure and dynamics of cartilage aggrecan’, Biomacromolecules, 2006, 7, 2162-2172.
(28) C.J.Bell, L.M.Carrick, J.Katta, Z.Jin, E.Ingham, A.Aggeli, N.Boden, T.A.Waigh, J.Fisher, Journal of Biomedical Materials Research PtA, 2006, 236-246.
2005
(27) *E di Cola, T.A.Waigh, J.Trinick, L.Tschovrebova, W.Hintzen, ‘The persistence length of titin from rabbit sacromere’, Biophysical Journal, 88, 2005, 4095-4106.
(26) *L.Carrick, M.Tassieri, T.A.Waigh, A.Aggeli, N.Boden, C.Bell, J.Fisher, E.Ingham, R.M.L.Evans, ‘The Internal Dynamic Modes of Charged Self-Assembled Peptide Fibrils’, Langmuir, 21, 2005, 3733-3737.
(25) *T.A.Waigh, ‘Microrheology of complex fluids’, Reports of Progress in Physics, 68, 2005, 685-742.
(24) *E. de Luca, T.A.Waigh, J.S.Kim, W.Hintzen, ‘Phase separation in randomly charged polystyrene sulphonate ionomers’, Polymer, 46, 2005, 7109-7117.
(23) *A.Papagiannopoulos, T.A.Waigh, A.Fluerasu, C.Fernyhough, A.Madsen ‘Microrheology of polymeric solutions using X-ray photon correlation spectroscopy’, Journal of Physics: Condensed Matter, 17, 2005, L279-285. Highlights of the ESRF 2005.
(22) *A.Papagiannopoulos, C.M.Fernyhough, T.A.Waigh, ‘The microrheology of polystyrene sulphonate combs in aqueous solutions’, Journal of Chemical Physics, 2005, 123, 214902.

2004
(21) V.Castellato, I.Hamley, T.A.Waigh, ‘Dynamic light scattering study of the dynamics of a gelled polymeric micellar system’, Journal of Chemical Physics, 121, 22, 2004, 11474-11480.
(20) *E.Di Cola, N.Plucktaveesak, T.A.Waigh, R.H.Colby, J.S.Tan, W.Pyckhout-Hintzen, R.K.Heenan, ‘Structure and dynamics in aqueous solutions of amphiliphilic maleic anhydride-containing alternating copolymers’, Macromolecules 2004, 37, 8457-8465.
(19) J.Fundin, V.Castellato, Z.Yang, I.W.Hamley, T.A.Waigh, C.Price, ‘A light scattering and X-ray scattering study of aqueous micellar solutions of a diblock copolymer of propylene oxide and ethylene oxide with solubilized alkylcyanobiphenyl liquid crystals’, Journal of Macromolecular Science - Physics, 2004, B43, 5, 893-912.
(18) C.J.Bell, L.M.Carrick, E.Ingham, A.Aggeli, N.Boden, T.A.Waigh, J.Fisher, ‘Synthetic peptides for the treatment of osteoarthritis’, 5th Symp International Cartilage Repair Society, Belgium, 2004, 27-30.
(17) A.Hodrien, A.Voice, T.A.Waigh, ‘DNA complexation for gene therapy’, on-line MRS bulletin.

2003
(16) P.J.Mawer, T.A.Waigh, R.Harding, T.C.B.McLeish, S.M.King, M.Bell, N.Boden, ‘Small angle neutron scattering from peptide nematic fluids and hydrogels under shear’, Langmuir, 2003, 19, 12, 4940-4949.
2002
(15) *T.A.Waigh, A.Papagiannopoulos, A.Voice, R.Bansil, A.P.Unwin, C.D.Dewhurst, B.Turner, N.Afdhal, ‘Entanglement coupling in porcine stomach mucin’, Langmuir, 2002, 18, 7188-7195.
2001
(14) T.A.Waigh, R.Ober, C.E.Williams, J.C.Galin, ‘Semi-dilute solutions of a solvophobic polyelectrolyte in nonaqueous solvents’, Macromolecules, 2001, 34, 1973-1980.
(13) A.M.Donald, L.Kato, P.Perry, T.A.Waigh, ‘Scattering studies of the internal structure of starch’, Starch, 53, 504-512, 2001.
2000
(12) T.A.Waigh, M.J.Gidley,B.U.Komanshek, A.M.Donald, ‘The phase transformations in starch during gelatinisation: a liquid crystalline approach’, Carbohydrate Research, 328, 2, 165-176, 2000 (Model for gelatinisation recently confirmed: Macromolecules 2002, 35, 8852-8859).
(11) A.M.Donald, P.A.Perry, T.A.Waigh, ‘Unravelling starch granule structure with small angle scattering’, CCP13 Newsletter, 2000.
(10) A.M.Donald, P.A.Perry, T.A.Waigh, ‘The impact of internal granule structure on processing and properties’, Starch 2000 Conference Proceedings, 45-52 ed T.L.Barsby, A.M.Donald, P.J.Frazier.
(9) T.A.Waigh, K. Lisa Kato, Athene M. Donald, Michael J. Gidley, Chris J. Clarke, Christian Riekel ‘Side-chain liquid-crystalline model for starch’, Starch, 52, 12, 450-460, 2000.
1999
(8) D.Baigl, M. Guedeau-Boudeville, R.Ober, F.Rieutord, O.Theodoly, T.Waigh, C.E.Williams, ‘Adsorption of hydrophobic polyelectrolytes as studied by in situ high energy X-ray reflectivity’. On-line cond-mat/0403139
Reviewed in Highlights of the ESRF 1998.
(7) T.A.Waigh, A.M.Donald, M.J.Gidley, F.Heidelbach, C.Riekel, ‘Analysis of the Native Structure of Starch Granules with Microfocus Small Angle X-ray Scattering’, Biopolymers, 49, 91-105, 1999. Reviewed in ‘Highlights of the European Synchrotron Radiation Facility’ 1998.
1998
(6) T.A.Waigh, P.Perry, A.M.Donald, M.J.Gidley, C.Riekel, ‘Chiral Side-Chain Liquid-Crystalline Properties of Starch’, Macromolecules, 31, 22, 7980-7984, 1998.
(5) C.He, A.M.Donald, A.C.Griffin, T.Waigh, A.H.Windle, ‘Self-Assembly of Hydrogen Bonded Main Chain Liquid Crystal Copolymer: Structure and Thermal Stability’, Journal of Polymer Physics B, 36, 1617-1624, 1998.
1997
(4) T.A.Waigh, M.F.Butler, I.Hopkinson, F.Heidelbach, C.Riekel, A.M.Donald, ‘Analysis of the Native Structure of Starch Granules with X-ray Microfocus Diffraction’, Macromolecules, 30, 13, 3813-3820, 1997. Reviewed in Nature, P.Calvert, 1997.
(3) A.M.Donald, P.J.Jenkins, T.A.Waigh, Highlights of the Rutherford Appleton Pulsed Spallation Source 1997.
1996
(2) T.A.Waigh, P.J.Jenkins, A.M.Donald, ‘Quantification of Water in Carbohydrate Lamellae using SANS’, Faraday Discussion, 1996, 103, 325-337
(1) A.M.Donald,T.A.Waigh, M.Debet, M.Gidley, A..Smith, ‘Application of Synchrotron Radiation to the Study of the Biosynthesis of Starch’, Proceedings of Starch 1996, Royal Society of Chemistry, 150-154.

Software
Dr. Salman Rogers developed a series of useful particle tracking routines while working in our group. A zipped file containing PolyParticleTracker and the associated documentation can be found here.